HCSGD entry for PAMR1
1. General information
| Official gene symbol | PAMR1 |
|---|---|
| Entrez ID | 25891 |
| Gene full name | peptidase domain containing associated with muscle regeneration 1 |
| Other gene symbols | DKFZP586H2123 RAMP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003824 | Catalytic activity | IEA | molecular_function |
| GO:0004252 | Serine-type endopeptidase activity | IEA | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0032960982 | 0.1281290908 | 0.1551996422 | 0.6898109634 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2388034293 |
| GSE13712_SHEAR | Down | -0.0185088953 |
| GSE13712_STATIC | Up | 0.1119060396 |
| GSE19018 | Up | 1.2267495727 |
| GSE19899_A1 | Down | -1.3578785507 |
| GSE19899_A2 | Down | -0.2453878423 |
| PubMed_21979375_A1 | Down | -1.6759173906 |
| PubMed_21979375_A2 | Up | 0.0163923445 |
| GSE35957 | Up | 1.0458857223 |
| GSE36640 | Up | 0.7403955994 |
| GSE54402 | Down | -0.9016414813 |
| GSE9593 | Up | 4.1141771122 |
| GSE43922 | Down | -0.5634484948 |
| GSE24585 | Up | 0.3322517105 |
| GSE37065 | Up | 0.6864970888 |
| GSE28863_A1 | Up | 0.5448676169 |
| GSE28863_A2 | Up | 0.6388549909 |
| GSE28863_A3 | Down | -0.6433122252 |
| GSE28863_A4 | Down | -0.0369609204 |
| GSE48662 | Up | 1.5182943740 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-3p | MIMAT0004509 | MIRT038765 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
