HCSGD entry for LRRTM2
1. General information
| Official gene symbol | LRRTM2 |
|---|---|
| Entrez ID | 26045 |
| Gene full name | leucine rich repeat transmembrane neuronal 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0042043 | Neurexin family protein binding | IEA | molecular_function |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
| GO:0050808 | Synapse organization | IEA | biological_process |
| GO:0060076 | Excitatory synapse | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8380988602 | 0.0719353292 | 0.9999902473 | 0.5049092800 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2465767189 |
| GSE13712_SHEAR | Down | -0.1179051878 |
| GSE13712_STATIC | Up | 0.1324772786 |
| GSE19018 | Down | -0.3480266735 |
| GSE19899_A1 | Down | -0.1066218836 |
| GSE19899_A2 | Down | -0.7209126851 |
| PubMed_21979375_A1 | Down | -0.1503684537 |
| PubMed_21979375_A2 | Down | -0.2276066032 |
| GSE35957 | Up | 0.1152010644 |
| GSE36640 | Down | -0.2397937439 |
| GSE54402 | Down | -0.0287993829 |
| GSE9593 | Down | -0.3494803674 |
| GSE43922 | Down | -0.9547463563 |
| GSE24585 | Up | 0.0042258787 |
| GSE37065 | Up | 0.2994990341 |
| GSE28863_A1 | Down | -0.0867823010 |
| GSE28863_A2 | Down | -0.1900143765 |
| GSE28863_A3 | Up | 0.2896783967 |
| GSE28863_A4 | Down | -0.1930513901 |
| GSE48662 | Up | 0.1235444493 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
