HCSGD entry for VPS33B

1. General information

Official gene symbolVPS33B
Entrez ID26276
Gene full namevacuolar protein sorting 33 homolog B (yeast)
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIDAcellular_component
GO:0005764LysosomeIDAcellular_component
GO:0005765Lysosomal membraneIEAcellular_component
GO:0005770Late endosomeIDAcellular_component
GO:0006904Vesicle docking involved in exocytosisIEAbiological_process
GO:0015031Protein transportIMPbiological_process
GO:0016192Vesicle-mediated transportIDAbiological_process
GO:0030897HOPS complexIDAcellular_component
GO:0031091Platelet alpha granuleIDAcellular_component
GO:0031902Late endosome membraneIEAcellular_component
GO:0032400Melanosome localizationIDAbiological_process
GO:0032418Lysosome localizationIDAbiological_process
GO:0048471Perinuclear region of cytoplasmIDAcellular_component
GO:0061025Membrane fusionIMPbiological_process
GO:0070889Platelet alpha granule organizationIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.32174787430.48108528930.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.4470057001
GSE13712_SHEARDown-0.1682683316
GSE13712_STATICDown-0.0964318277
GSE19018Up0.0172735779
GSE19899_A1Down-0.0414490735
GSE19899_A2Up0.4687041054
PubMed_21979375_A1Up0.1582509729
PubMed_21979375_A2Up0.4882827477
GSE35957Down-0.2653145685
GSE36640Down-0.1535070110
GSE54402Up0.3053145361
GSE9593Down-0.1857627740
GSE43922Up0.1005768315
GSE24585Up0.0252317185
GSE37065Up0.0254771939
GSE28863_A1Up0.0084961424
GSE28863_A2Up0.0273098400
GSE28863_A3Down-0.9761868725
GSE28863_A4Up0.0478719603
GSE48662Up0.0299846398

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.