HCSGD entry for LYPD3
1. General information
| Official gene symbol | LYPD3 |
|---|---|
| Entrez ID | 27076 |
| Gene full name | LY6/PLAUR domain containing 3 |
| Other gene symbols | C4.4A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006928 | Cellular component movement | IEA | biological_process |
| GO:0007160 | Cell-matrix adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043236 | Laminin binding | IEA | molecular_function |
| GO:0046658 | Anchored component of plasma membrane | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0712808670 | 0.9527018958 | 0.5692304915 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0256832389 |
| GSE13712_SHEAR | Down | -0.0418964238 |
| GSE13712_STATIC | Up | 0.0290866263 |
| GSE19018 | Up | 0.0457067695 |
| GSE19899_A1 | Up | 0.0014356610 |
| GSE19899_A2 | Up | 0.4037755838 |
| PubMed_21979375_A1 | Up | 0.0639937399 |
| PubMed_21979375_A2 | Down | -0.2181555106 |
| GSE35957 | Down | -0.0679867353 |
| GSE36640 | Up | 0.0949694061 |
| GSE54402 | Up | 1.1530947670 |
| GSE9593 | Up | 0.2184379515 |
| GSE43922 | Up | 0.0475512943 |
| GSE24585 | Up | 0.2832649271 |
| GSE37065 | Up | 0.5567290945 |
| GSE28863_A1 | Up | 0.0231832854 |
| GSE28863_A2 | Down | -0.0460454361 |
| GSE28863_A3 | Up | 0.3916280594 |
| GSE28863_A4 | Up | 0.3687254008 |
| GSE48662 | Down | -0.0410868796 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018038 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025845 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
