HCSGD entry for TAF5L
1. General information
| Official gene symbol | TAF5L |
|---|---|
| Entrez ID | 27097 |
| Gene full name | TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa |
| Other gene symbols | PAF65B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0003713 | Transcription coactivator activity | IDA | molecular_function |
| GO:0004402 | Histone acetyltransferase activity | IDA | molecular_function |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0030914 | STAGA complex | IDA | cellular_component |
| GO:0033276 | Transcription factor TFTC complex | IDA | cellular_component |
| GO:0043966 | Histone H3 acetylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5922416360 | 0.2681940808 | 0.9999902473 | 0.9910341710 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2078376732 |
| GSE13712_SHEAR | Up | 0.4326591815 |
| GSE13712_STATIC | Up | 0.2625339762 |
| GSE19018 | Down | -0.6270764917 |
| GSE19899_A1 | Down | -0.0773126059 |
| GSE19899_A2 | Down | -0.0055086536 |
| PubMed_21979375_A1 | Up | 0.2165843102 |
| PubMed_21979375_A2 | Up | 0.4810573123 |
| GSE35957 | Down | -0.2224764384 |
| GSE36640 | Down | -0.4636017687 |
| GSE54402 | Up | 0.0516561616 |
| GSE9593 | Up | 0.0551758318 |
| GSE43922 | Up | 0.0992392566 |
| GSE24585 | Up | 0.1688202137 |
| GSE37065 | Down | -0.0728539324 |
| GSE28863_A1 | Down | -0.1231353479 |
| GSE28863_A2 | Up | 0.2596705976 |
| GSE28863_A3 | Down | -0.5213223918 |
| GSE28863_A4 | Up | 0.0029720197 |
| GSE48662 | Down | -0.0925712217 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020642 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027492 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037149 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181b-5p | MIMAT0000257 | MIRT047279 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051804 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052518 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
