HCSGD entry for ARFIP1
1. General information
| Official gene symbol | ARFIP1 |
|---|---|
| Entrez ID | 27236 |
| Gene full name | ADP-ribosylation factor interacting protein 1 |
| Other gene symbols | HSU52521 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IDA | cellular_component |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0006886 | Intracellular protein transport | IDA | biological_process |
| GO:0019904 | Protein domain specific binding | IEA | molecular_function |
| GO:0042802 | Identical protein binding | IEA | molecular_function |
| GO:0050708 | Regulation of protein secretion | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0744382546 | 0.9230533946 | 0.5789861998 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3492916207 |
| GSE13712_SHEAR | Up | 0.1047135449 |
| GSE13712_STATIC | Up | 0.0231872038 |
| GSE19018 | Up | 0.0359990234 |
| GSE19899_A1 | Up | 0.2920759113 |
| GSE19899_A2 | Up | 0.2223266011 |
| PubMed_21979375_A1 | Up | 0.9603193683 |
| PubMed_21979375_A2 | Up | 0.2290863858 |
| GSE35957 | Up | 0.5082359073 |
| GSE36640 | Up | 0.1629777654 |
| GSE54402 | Up | 0.0935768321 |
| GSE9593 | Up | 0.1728275981 |
| GSE43922 | Up | 0.2040536635 |
| GSE24585 | Up | 0.3010783848 |
| GSE37065 | Down | -0.0298054607 |
| GSE28863_A1 | Down | -0.0477160061 |
| GSE28863_A2 | Up | 0.0654618034 |
| GSE28863_A3 | Down | -0.8049338236 |
| GSE28863_A4 | Down | -0.1917027379 |
| GSE48662 | Up | 0.0856622461 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT001571 | pSILAC//Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001571 | Reporter assay;Other | Non-Functional MTI | 20584899 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002668 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002668 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT023478 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037039 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
