HCSGD entry for RRP7A
1. General information
| Official gene symbol | RRP7A |
|---|---|
| Entrez ID | 27341 |
| Gene full name | ribosomal RNA processing 7 homolog A (S. cerevisiae) |
| Other gene symbols | BK126B4.3 CGI-96 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3273449641 | 0.2589598002 | 0.9999902473 | 0.9762158935 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0852425221 |
| GSE13712_SHEAR | Up | 0.3920601180 |
| GSE13712_STATIC | Up | 0.5918947290 |
| GSE19018 | Down | -0.1445968852 |
| GSE19899_A1 | Down | -0.0898957948 |
| GSE19899_A2 | Up | 0.2765965003 |
| PubMed_21979375_A1 | Up | 0.3922287124 |
| PubMed_21979375_A2 | Up | 0.1669685579 |
| GSE35957 | Down | -0.5024499651 |
| GSE36640 | Down | -0.2504264486 |
| GSE54402 | Up | 0.3206131282 |
| GSE9593 | Down | -0.7855989609 |
| GSE43922 | Down | -0.0224334324 |
| GSE24585 | Down | -0.6297746878 |
| GSE37065 | Down | -0.2644232738 |
| GSE28863_A1 | Up | 0.0723043317 |
| GSE28863_A2 | Up | 0.1602360089 |
| GSE28863_A3 | Down | -0.0043543452 |
| GSE28863_A4 | Up | 0.2156628536 |
| GSE48662 | Up | 0.1136899725 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032420 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-455-3p | MIMAT0004784 | MIRT037840 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043534 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045999 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
