HCSGD entry for CCDC88B

1. General information

Official gene symbolCCDC88B
Entrez ID283234
Gene full namecoiled-coil domain containing 88B
Other gene symbolsBRLZ CCDC88 HKRP3 gipie
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

Not in the Gene Ontology

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.84451104060.41103282930.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0194626078
GSE13712_SHEARDown-0.3010426542
GSE13712_STATICDown-0.0045675564
GSE19018Up0.1430808031
GSE19899_A1Up0.0472028693
GSE19899_A2Down-0.0540796655
PubMed_21979375_A1Down-0.2980763565
PubMed_21979375_A2Down-0.1681503231
GSE35957Down-0.0268884469
GSE36640Down-0.0732022780
GSE54402Down-0.0647430096
GSE9593Up0.0403704670
GSE43922Up0.0354744464
GSE24585Down-0.0567762921
GSE37065Down-0.0701717926
GSE28863_A1Down-0.2259428580
GSE28863_A2Down-0.1649171242
GSE28863_A3Up0.3940025079
GSE28863_A4Up0.2272947404
GSE48662Down-0.0951908008

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-375MIMAT0000728MIRT019981MicroarrayFunctional MTI (Weak)20215506
Entries Per Page
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.