HCSGD entry for GATC
1. General information
| Official gene symbol | GATC |
|---|---|
| Entrez ID | 283459 |
| Gene full name | glutamyl-tRNA(Gln) amidotransferase, subunit C |
| Other gene symbols | 15E1.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IDA IEA | cellular_component |
| GO:0006450 | Regulation of translational fidelity | IEA | biological_process |
| GO:0030956 | Glutamyl-tRNA(Gln) amidotransferase complex | IDA | cellular_component |
| GO:0032543 | Mitochondrial translation | IMP | biological_process |
| GO:0050567 | Glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | IDA | molecular_function |
| GO:0070681 | Glutaminyl-tRNAGln biosynthesis via transamidation | IDA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1269787584 | 0.5626917062 | 0.7256204733 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4913051401 |
| GSE13712_SHEAR | Down | -0.1793902572 |
| GSE13712_STATIC | Down | -0.3686376937 |
| GSE19018 | Down | -0.2739137068 |
| GSE19899_A1 | Down | -0.0484725729 |
| GSE19899_A2 | Up | 0.7201448404 |
| PubMed_21979375_A1 | Up | 0.7623703601 |
| PubMed_21979375_A2 | Up | 0.6592953723 |
| GSE35957 | Up | 0.5937663809 |
| GSE36640 | Up | 0.2186487044 |
| GSE54402 | Up | 0.2611097020 |
| GSE9593 | Up | 0.0214596553 |
| GSE43922 | Up | 0.1301647063 |
| GSE24585 | Down | -0.2134626338 |
| GSE37065 | Down | -0.0434091817 |
| GSE28863_A1 | Down | -0.2258017783 |
| GSE28863_A2 | Up | 0.1236725723 |
| GSE28863_A3 | Down | -0.5575248955 |
| GSE28863_A4 | Up | 0.1661558009 |
| GSE48662 | Down | -0.1199544804 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028589 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032329 | Proteomics | Functional MTI (Weak) | 18668040 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
