HCSGD entry for TMOD2
1. General information
| Official gene symbol | TMOD2 |
|---|---|
| Entrez ID | 29767 |
| Gene full name | tropomodulin 2 (neuronal) |
| Other gene symbols | N-TMOD NTMOD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005523 | Tropomyosin binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0007270 | Neuron-neuron synaptic transmission | IEA | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0007611 | Learning or memory | IEA | biological_process |
| GO:0030426 | Growth cone | IEA | cellular_component |
| GO:0045745 | Positive regulation of G-protein coupled receptor protein signaling pathway | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7429174271 | 0.0160000722 | 0.9999902473 | 0.2465391228 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0915364208 |
| GSE13712_SHEAR | Down | -0.0983296089 |
| GSE13712_STATIC | Down | -0.2476762564 |
| GSE19018 | Down | -0.0358704259 |
| GSE19899_A1 | Down | -0.5511868096 |
| GSE19899_A2 | Down | -0.0904396506 |
| PubMed_21979375_A1 | Down | -1.5312126002 |
| PubMed_21979375_A2 | Down | -0.2870816782 |
| GSE35957 | Up | 0.3767701609 |
| GSE36640 | Up | 2.1304494659 |
| GSE54402 | Down | -0.3262814115 |
| GSE9593 | Up | 0.5434032105 |
| GSE43922 | Down | -0.7060389952 |
| GSE24585 | Down | -0.5809282313 |
| GSE37065 | Down | -0.0806861470 |
| GSE28863_A1 | Down | -0.5108373821 |
| GSE28863_A2 | Down | -0.2208894199 |
| GSE28863_A3 | Down | -0.1798602828 |
| GSE28863_A4 | Down | -0.1127442068 |
| GSE48662 | Up | 0.0784255855 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018829 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025435 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-484 | MIMAT0002174 | MIRT041699 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
