HCSGD entry for HIST1H2BB
1. General information
| Official gene symbol | HIST1H2BB |
|---|---|
| Entrez ID | 3018 |
| Gene full name | histone cluster 1, H2bb |
| Other gene symbols | H2B.1 H2B/f H2BFF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | NAS | cellular_component |
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | NAS | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0242813609 | 0.1369968048 | 0.3690009815 | 0.7130498121 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0101965859 |
| GSE13712_SHEAR | Up | 0.3903791018 |
| GSE13712_STATIC | Up | 0.2145058152 |
| GSE19018 | Up | 0.1178460814 |
| GSE19899_A1 | Down | -0.0149978769 |
| GSE19899_A2 | Up | 0.2397390687 |
| PubMed_21979375_A1 | Up | 0.2255257810 |
| PubMed_21979375_A2 | Up | 0.2479674548 |
| GSE35957 | Down | -0.0871670864 |
| GSE36640 | Down | -2.6126083946 |
| GSE54402 | Down | -0.1005966882 |
| GSE9593 | Up | 0.0230964965 |
| GSE43922 | Down | -0.9464262244 |
| GSE24585 | Up | 0.2949212793 |
| GSE37065 | Down | -0.6378555594 |
| GSE28863_A1 | Down | -0.5362443254 |
| GSE28863_A2 | Up | 0.8808856313 |
| GSE28863_A3 | Up | 1.6807132301 |
| GSE28863_A4 | Down | -0.0395507034 |
| GSE48662 | Up | 0.6975623494 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025273 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-652-3p | MIMAT0003322 | MIRT039494 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048188 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
