HCSGD entry for ST6GALNAC6
1. General information
| Official gene symbol | ST6GALNAC6 |
|---|---|
| Entrez ID | 30815 |
| Gene full name | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
| Other gene symbols | RP11-203J24.3 SIAT7F ST6GALNACVI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0001574 | Ganglioside biosynthetic process | ISS | biological_process |
| GO:0001665 | Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity | ISS | molecular_function |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005886 | Plasma membrane | NAS | cellular_component |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0006677 | Glycosylceramide metabolic process | IDA | biological_process |
| GO:0006687 | Glycosphingolipid metabolic process | IDA | biological_process |
| GO:0008373 | Sialyltransferase activity | IDA IEA ISS | molecular_function |
| GO:0009100 | Glycoprotein metabolic process | IDA | biological_process |
| GO:0009312 | Oligosaccharide biosynthetic process | ISS | biological_process |
| GO:0009988 | Cell-cell recognition | IC | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0097503 | Sialylation | IDA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9484086281 | 0.0485441549 | 0.9999902473 | 0.4121711935 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1374613346 |
| GSE13712_SHEAR | Down | -0.7819983143 |
| GSE13712_STATIC | Down | -0.3872272946 |
| GSE19018 | Down | -0.0708945399 |
| GSE19899_A1 | Down | -0.5029299305 |
| GSE19899_A2 | Down | -0.3224521155 |
| PubMed_21979375_A1 | Down | -0.6036509194 |
| PubMed_21979375_A2 | Down | -0.3489315587 |
| GSE35957 | Down | -0.2169913899 |
| GSE36640 | Up | 0.2709693930 |
| GSE54402 | Down | -0.2575945692 |
| GSE9593 | Up | 0.2986205497 |
| GSE43922 | Down | -0.2693482880 |
| GSE24585 | Up | 0.0081523397 |
| GSE37065 | Down | -0.3266511197 |
| GSE28863_A1 | Up | 0.1434770441 |
| GSE28863_A2 | Up | 0.0431611157 |
| GSE28863_A3 | Up | 0.0128943799 |
| GSE28863_A4 | Down | -0.1065462227 |
| GSE48662 | Up | 0.5610248180 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
