HCSGD entry for HOXD1

1. General information

Official gene symbolHOXD1
Entrez ID3231
Gene full namehomeobox D1
Other gene symbolsHOX4 HOX4G Hox-4.7
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0019233Sensory perception of painIEAbiological_process
GO:0030182Neuron differentiationIEAbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0048706Embryonic skeletal system developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30600909540.95946434790.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0304081178
GSE13712_SHEARUp0.2473076382
GSE13712_STATICUp0.2236232989
GSE19018Down-0.0087951595
GSE19899_A1Up0.0756203960
GSE19899_A2Up0.1735954383
PubMed_21979375_A1Up0.2080029067
PubMed_21979375_A2Down-0.0285645270
GSE35957Up0.1848118007
GSE36640Down-0.0109452224
GSE54402Up0.0258109746
GSE9593Up0.1711110091
GSE43922Up0.0538046144
GSE24585Up0.3958144620
GSE37065Up0.0157923260
GSE28863_A1Down-0.0719653615
GSE28863_A2Down-0.0027535951
GSE28863_A3Up0.2031275165
GSE28863_A4Up0.0343801323
GSE48662Down-0.0204641120

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.