HCSGD entry for HOXD3

1. General information

Official gene symbolHOXD3
Entrez ID3232
Gene full namehomeobox D3
Other gene symbolsHOX1D HOX4 HOX4A Hox-4.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusICcellular_component
GO:0006351Transcription, DNA-templatedIMPbiological_process
GO:0007160Cell-matrix adhesionIDAbiological_process
GO:0007219Notch signaling pathwayIMPbiological_process
GO:0009952Anterior/posterior pattern specificationIEA ISSbiological_process
GO:0010628Positive regulation of gene expressionIMPbiological_process
GO:0021615Glossopharyngeal nerve morphogenesisIEAbiological_process
GO:0030878Thyroid gland developmentIEA ISSbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0045666Positive regulation of neuron differentiationIEA ISSbiological_process
GO:0048704Embryonic skeletal system morphogenesisIEA ISSbiological_process
GO:0051216Cartilage developmentIEA ISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.99466476580.13153474790.99999024730.6989957803

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.3615738059

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-17-3pMIMAT0000071MIRT050780CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.