HCSGD entry for FOXN2
1. General information
| Official gene symbol | FOXN2 |
|---|---|
| Entrez ID | 3344 |
| Gene full name | forkhead box N2 |
| Other gene symbols | HTLF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0035914 | Skeletal muscle cell differentiation | IEA | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7559328065 | 0.0667378595 | 0.9999902473 | 0.4872696810 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0098912038 |
| GSE13712_SHEAR | Up | 0.0256428940 |
| GSE13712_STATIC | Down | -0.0037611412 |
| GSE19018 | Down | -0.1423379967 |
| GSE19899_A1 | Down | -0.1979461565 |
| GSE19899_A2 | Up | 0.0464677879 |
| PubMed_21979375_A1 | Up | 0.6596784668 |
| PubMed_21979375_A2 | Up | 0.0833520526 |
| GSE35957 | Down | -0.2583119299 |
| GSE36640 | Down | -0.7452692928 |
| GSE54402 | Up | 0.3035035897 |
| GSE9593 | Down | -0.1775376150 |
| GSE43922 | Up | 0.0832237439 |
| GSE24585 | Down | -0.7055604515 |
| GSE37065 | Up | 0.1498811766 |
| GSE28863_A1 | Down | -0.4743694476 |
| GSE28863_A2 | Up | 0.4310598051 |
| GSE28863_A3 | Down | -0.9003043935 |
| GSE28863_A4 | Down | -0.2402508754 |
| GSE48662 | Up | 0.2716898149 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT021206 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024223 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028367 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-188-5p | MIMAT0000457 | MIRT044900 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047161 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048384 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
