HCSGD entry for INPP4A
1. General information
| Official gene symbol | INPP4A |
|---|---|
| Entrez ID | 3631 |
| Gene full name | inositol polyphosphate-4-phosphatase, type I, 107kDa |
| Other gene symbols | INPP4 TVAS1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006661 | Phosphatidylinositol biosynthetic process | TAS | biological_process |
| GO:0007165 | Signal transduction | TAS | biological_process |
| GO:0016316 | Phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity | IEA | molecular_function |
| GO:0034597 | Phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity | IEA | molecular_function |
| GO:0043647 | Inositol phosphate metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3787484252 | 0.8925231868 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0510571499 |
| GSE13712_SHEAR | Down | -0.0609063438 |
| GSE13712_STATIC | Up | 0.0734371088 |
| GSE19018 | Up | 0.0887382032 |
| GSE19899_A1 | Down | -0.0737477255 |
| GSE19899_A2 | Down | -0.0066445455 |
| PubMed_21979375_A1 | Up | 0.2267185443 |
| PubMed_21979375_A2 | Up | 0.2850915555 |
| GSE35957 | Up | 0.1304696520 |
| GSE36640 | Up | 0.0881493839 |
| GSE54402 | Down | -0.0391975216 |
| GSE9593 | Up | 0.2473229154 |
| GSE43922 | Up | 0.0686407678 |
| GSE24585 | Up | 0.2327244137 |
| GSE37065 | Down | -0.0761677952 |
| GSE28863_A1 | Up | 0.2092235595 |
| GSE28863_A2 | Up | 0.1607226443 |
| GSE28863_A3 | Down | -0.0569281621 |
| GSE28863_A4 | Up | 0.0088087657 |
| GSE48662 | Down | -0.0116961098 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1301-3p | MIMAT0005797 | MIRT036040 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037226 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-421 | MIMAT0003339 | MIRT039407 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT046283 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
