HCSGD entry for LY6E
1. General information
| Official gene symbol | LY6E |
|---|---|
| Entrez ID | 4061 |
| Gene full name | lymphocyte antigen 6 complex, locus E |
| Other gene symbols | RIG-E RIGE SCA-2 SCA2 TSA-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001701 | In utero embryonic development | IEA | biological_process |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007166 | Cell surface receptor signaling pathway | TAS | biological_process |
| GO:0030325 | Adrenal gland development | IEA | biological_process |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
| GO:0035265 | Organ growth | IEA | biological_process |
| GO:0042415 | Norepinephrine metabolic process | IEA | biological_process |
| GO:0048242 | Epinephrine secretion | IEA | biological_process |
| GO:0055010 | Ventricular cardiac muscle tissue morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0212637590 | 0.2493420805 | 0.3513284639 | 0.9590832554 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1114095845 |
| GSE13712_SHEAR | Up | 2.5815912539 |
| GSE13712_STATIC | Up | 1.3391910119 |
| GSE19018 | Up | 0.2273093323 |
| GSE19899_A1 | Down | -0.4119311315 |
| GSE19899_A2 | Up | 0.6969388454 |
| PubMed_21979375_A1 | Down | -0.7012528672 |
| PubMed_21979375_A2 | Up | 0.3369273394 |
| GSE35957 | Down | -1.8508300803 |
| GSE36640 | Up | 0.2271652574 |
| GSE54402 | Down | -0.5564438820 |
| GSE9593 | Up | 0.3632876515 |
| GSE43922 | Down | -0.0009013491 |
| GSE24585 | Down | -0.6190592087 |
| GSE37065 | Up | 0.5401748360 |
| GSE28863_A1 | Up | 0.1181466727 |
| GSE28863_A2 | Up | 0.3914962358 |
| GSE28863_A3 | Up | 0.1849352758 |
| GSE28863_A4 | Up | 0.0110734824 |
| GSE48662 | Up | 0.5870449784 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT036974 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037658 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
