HCSGD entry for FAM19A1

1. General information

Official gene symbolFAM19A1
Entrez ID407738
Gene full namefamily with sequence similarity 19 (chemokine (C-C motif)-like), member A1
Other gene symbolsTAFA-1 TAFA1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionIEAcellular_component
GO:0005783Endoplasmic reticulumIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.52327279740.73681814900.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0097942211
GSE13712_SHEARUp0.1042343264
GSE13712_STATICDown-0.0351905213
GSE19018Up0.0657949253
GSE19899_A1Up0.0408874083
GSE19899_A2Down-0.2552487872
PubMed_21979375_A1Up0.1031984072
PubMed_21979375_A2Up0.0158356606
GSE35957Up0.0671289015
GSE36640Up0.0344323574
GSE54402Down-0.0728783923
GSE9593Down-0.2729499061
GSE43922Up0.0133152163
GSE24585Down-0.0523161259
GSE37065Up0.1212849560
GSE28863_A1Down-0.0772406637
GSE28863_A2Up0.7050134646
GSE28863_A3Up0.0155547037
GSE28863_A4Up0.2236541924
GSE48662Down-0.0522984657

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-125b-5pMIMAT0000423NAhsa-miR-125b18056640
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6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.