HCSGD entry for MYBPC1
1. General information
| Official gene symbol | MYBPC1 |
|---|---|
| Entrez ID | 4604 |
| Gene full name | myosin binding protein C, slow type |
| Other gene symbols | LCCS4 MYBPCC MYBPCS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006936 | Muscle contraction | IEA | biological_process |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0008307 | Structural constituent of muscle | TAS | molecular_function |
| GO:0030016 | Myofibril | ISS | cellular_component |
| GO:0030049 | Muscle filament sliding | TAS | biological_process |
| GO:0031432 | Titin binding | ISS | molecular_function |
| GO:0032982 | Myosin filament | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8677558034 | 0.5156920482 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0222016280 |
| GSE13712_SHEAR | Down | -0.1782297866 |
| GSE13712_STATIC | Down | -0.3312242231 |
| GSE19018 | Down | -0.2415715594 |
| GSE19899_A1 | Up | 0.0334218382 |
| GSE19899_A2 | Down | -0.0572062275 |
| PubMed_21979375_A1 | Up | 0.3521942701 |
| PubMed_21979375_A2 | Down | -0.1307549061 |
| GSE35957 | Down | -0.0628996743 |
| GSE36640 | Down | -0.0073300475 |
| GSE54402 | Up | 0.0655607853 |
| GSE9593 | Down | -0.0277541840 |
| GSE43922 | Up | 0.0218493876 |
| GSE24585 | Up | 0.3314587821 |
| GSE37065 | Down | -0.0381028489 |
| GSE28863_A1 | Down | -0.0896161884 |
| GSE28863_A2 | Up | 0.0001369933 |
| GSE28863_A3 | Up | 0.0784530584 |
| GSE28863_A4 | Up | 0.0121194497 |
| GSE48662 | Down | -0.0515522643 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028918 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-130b-5p | MIMAT0004680 | MIRT038283 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
