HCSGD entry for STMN3
1. General information
| Official gene symbol | STMN3 |
|---|---|
| Entrez ID | 50861 |
| Gene full name | stathmin-like 3 |
| Other gene symbols | SCLIP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA ISS | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0019904 | Protein domain specific binding | IEA ISS | molecular_function |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0030426 | Growth cone | IEA | cellular_component |
| GO:0031110 | Regulation of microtubule polymerization or depolymerization | IEA | biological_process |
| GO:0031122 | Cytoplasmic microtubule organization | IEA ISS | biological_process |
| GO:0031175 | Neuron projection development | IEA ISS | biological_process |
| GO:0032314 | Regulation of Rac GTPase activity | IEA ISS | biological_process |
| GO:0035021 | Negative regulation of Rac protein signal transduction | IEA ISS | biological_process |
| GO:0051493 | Regulation of cytoskeleton organization | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7716692603 | 0.0258943771 | 0.9999902473 | 0.3086112721 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1489327585 |
| GSE13712_SHEAR | Down | -1.7626735019 |
| GSE13712_STATIC | Down | -0.3227765440 |
| GSE19018 | Up | 0.3014433548 |
| GSE19899_A1 | Up | 0.0022111165 |
| GSE19899_A2 | Down | -0.3142219816 |
| PubMed_21979375_A1 | Down | -0.6035042923 |
| PubMed_21979375_A2 | Down | -1.2251676964 |
| GSE35957 | Down | -0.5273704949 |
| GSE36640 | Down | -1.9119976490 |
| GSE54402 | Up | 0.2064967350 |
| GSE9593 | Down | -0.2104683859 |
| GSE43922 | Down | -0.0007065328 |
| GSE24585 | Up | 0.0743252054 |
| GSE37065 | Down | -0.4165672760 |
| GSE28863_A1 | Down | -0.2998270731 |
| GSE28863_A2 | Up | 0.0172143284 |
| GSE28863_A3 | Up | 0.4280464585 |
| GSE28863_A4 | Up | 0.2373617503 |
| GSE48662 | Up | 0.0257052370 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038576 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048052 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049539 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052675 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
