HCSGD entry for TRAPPC12
1. General information
| Official gene symbol | TRAPPC12 |
|---|---|
| Entrez ID | 51112 |
| Gene full name | trafficking protein particle complex 12 |
| Other gene symbols | TTC-15 TTC15 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8614985487 | 0.1287931120 | 0.9999902473 | 0.6908423680 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2056614026 |
| GSE13712_SHEAR | Down | -0.5795223201 |
| GSE13712_STATIC | Up | 0.0899733599 |
| GSE19018 | Down | -0.3560525286 |
| GSE19899_A1 | Down | -0.3777364994 |
| GSE19899_A2 | Down | -0.7577613618 |
| PubMed_21979375_A1 | Down | -0.3775376287 |
| PubMed_21979375_A2 | Up | 0.0394034965 |
| GSE35957 | Down | -0.5179575404 |
| GSE36640 | Up | 0.0525814556 |
| GSE54402 | Up | 0.2035627076 |
| GSE9593 | Up | 0.0264739852 |
| GSE43922 | Down | -0.0303269661 |
| GSE24585 | Down | -0.3766973454 |
| GSE37065 | Down | -0.0786789828 |
| GSE28863_A1 | Up | 0.1519681174 |
| GSE28863_A2 | Up | 0.2473861085 |
| GSE28863_A3 | Up | 0.0473272379 |
| GSE28863_A4 | Down | -0.0172714462 |
| GSE48662 | Up | 0.1432722242 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1914-5p | MIMAT0007889 | MIRT035795 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037652 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047738 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
