HCSGD entry for MRTO4
1. General information
| Official gene symbol | MRTO4 |
|---|---|
| Entrez ID | 51154 |
| Gene full name | mRNA turnover 4 homolog (S. cerevisiae) |
| Other gene symbols | C1orf33 MRT4 dJ657E11.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0031965 | Nuclear membrane | IDA | cellular_component |
| GO:0042254 | Ribosome biogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1875569355 | 0.0689859656 | 0.8440222431 | 0.4953628751 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1953902420 |
| GSE13712_SHEAR | Up | 0.0826841567 |
| GSE13712_STATIC | Up | 0.1523518341 |
| GSE19018 | Down | -0.3733166852 |
| GSE19899_A1 | Up | 0.2896485112 |
| GSE19899_A2 | Up | 0.0361284608 |
| PubMed_21979375_A1 | Up | 0.5586098740 |
| PubMed_21979375_A2 | Down | -0.2531013339 |
| GSE35957 | Down | -0.1998128469 |
| GSE36640 | Down | -0.8389514119 |
| GSE54402 | Up | 0.6305354964 |
| GSE9593 | Down | -0.4720595806 |
| GSE43922 | Up | 0.4961434815 |
| GSE24585 | Down | -0.8167997124 |
| GSE37065 | Down | -0.1928551582 |
| GSE28863_A1 | Down | -0.4401213038 |
| GSE28863_A2 | Down | -0.1320748126 |
| GSE28863_A3 | Down | -0.3922153711 |
| GSE28863_A4 | Up | 0.1797298208 |
| GSE48662 | Up | 0.0114409282 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027708 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045945 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
