HCSGD entry for TRMT112
1. General information
| Official gene symbol | TRMT112 |
|---|---|
| Entrez ID | 51504 |
| Gene full name | tRNA methyltransferase 11-2 homolog (S. cerevisiae) |
| Other gene symbols | HSPC152 HSPC170 TRM112 TRMT11-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0008276 | Protein methyltransferase activity | IDA | molecular_function |
| GO:0018364 | Peptidyl-glutamine methylation | IDA | biological_process |
| GO:0043234 | Protein complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5863887238 | 0.2219179059 | 0.9999902473 | 0.9058646457 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3830981423 |
| GSE13712_SHEAR | Down | -0.0513717184 |
| GSE13712_STATIC | Down | -0.1863629423 |
| GSE19018 | Down | -0.0043578684 |
| GSE19899_A1 | Down | -0.4541324790 |
| GSE19899_A2 | Down | -0.3905148733 |
| PubMed_21979375_A1 | Up | 0.0789733114 |
| PubMed_21979375_A2 | Down | -0.2453115624 |
| GSE35957 | Down | -0.2456015191 |
| GSE36640 | Down | -0.2821497780 |
| GSE54402 | Up | 0.2602968086 |
| GSE9593 | Down | -0.1991791933 |
| GSE43922 | Up | 0.0416571296 |
| GSE24585 | Down | -0.2220094081 |
| GSE37065 | Up | 0.2246761266 |
| GSE28863_A1 | Down | -0.1952636443 |
| GSE28863_A2 | Up | 0.0001206567 |
| GSE28863_A3 | Down | -0.0256767904 |
| GSE28863_A4 | Up | 0.3667567014 |
| GSE48662 | Down | -0.1261862745 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT021995 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
