HCSGD entry for RTFDC1
1. General information
| Official gene symbol | RTFDC1 |
|---|---|
| Entrez ID | 51507 |
| Gene full name | replication termination factor 2 domain containing 1 |
| Other gene symbols | C20orf43 CDAO5 HSPC164 SHUJUN-3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9669739866 | 0.2094074541 | 0.9999902473 | 0.8847212841 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2958215296 |
| GSE13712_SHEAR | Down | -0.1601368743 |
| GSE13712_STATIC | Down | -0.1489481861 |
| GSE19018 | Down | -0.0304028357 |
| GSE19899_A1 | Down | -0.4474994859 |
| GSE19899_A2 | Up | 0.0007206444 |
| PubMed_21979375_A1 | Down | -0.1410762104 |
| PubMed_21979375_A2 | Down | -0.4183079512 |
| GSE35957 | Up | 0.1665177682 |
| GSE36640 | Down | -0.1908976042 |
| GSE54402 | Down | -0.0492625922 |
| GSE9593 | Up | 0.0533436172 |
| GSE43922 | Down | -0.1169352638 |
| GSE24585 | Down | -0.0839336782 |
| GSE37065 | Down | -0.1908474750 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0286452885 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020964 | Proteomics | Functional MTI (Weak) | 20584899 |
| hsa-miR-502-3p | MIMAT0004775 | MIRT037983 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-500a-3p | MIMAT0002871 | MIRT041156 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181b-5p | MIMAT0000257 | MIRT047280 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050581 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
