HCSGD entry for TAF9B
1. General information
| Official gene symbol | TAF9B |
|---|---|
| Entrez ID | 51616 |
| Gene full name | TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa |
| Other gene symbols | DN-7 DN7 TAF9L TAFII31L TFIID-31 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IMP | biological_process |
| GO:0003714 | Transcription corepressor activity | IC | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005669 | Transcription factor TFIID complex | IDA | cellular_component |
| GO:0006352 | DNA-templated transcription, initiation | IEA | biological_process |
| GO:0012501 | Programmed cell death | IEA | biological_process |
| GO:0014070 | Response to organic cyclic compound | IEA | biological_process |
| GO:0030307 | Positive regulation of cell growth | IMP | biological_process |
| GO:0033276 | Transcription factor TFTC complex | IDA | cellular_component |
| GO:0043066 | Negative regulation of apoptotic process | IMP | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
| GO:0050821 | Protein stabilization | IDA | biological_process |
| GO:1902166 | Negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | IC | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9888887428 | 0.0020401391 | 0.9999902473 | 0.0859176000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1497704482 |
| GSE13712_SHEAR | Down | -0.2935992126 |
| GSE13712_STATIC | Down | -0.2041876108 |
| GSE19018 | Down | -0.5209519208 |
| GSE19899_A1 | Down | -0.3849157033 |
| GSE19899_A2 | Down | -1.9287444961 |
| PubMed_21979375_A1 | Down | -1.0786202194 |
| PubMed_21979375_A2 | Down | -1.5375560748 |
| GSE35957 | Down | -0.0599857609 |
| GSE36640 | Down | -0.9296506199 |
| GSE54402 | Down | -0.5991352947 |
| GSE9593 | Down | -0.3082013403 |
| GSE43922 | Down | -1.5505475019 |
| GSE24585 | Up | 0.5479043762 |
| GSE37065 | Down | -0.0130417260 |
| GSE28863_A1 | Down | -0.0105809887 |
| GSE28863_A2 | Down | -0.2433769211 |
| GSE28863_A3 | Down | -0.2639227716 |
| GSE28863_A4 | Down | -0.1555336547 |
| GSE48662 | Down | -0.5498835164 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT001587 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024725 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026846 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030171 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041388 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050895 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052468 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
