HCSGD entry for PIGF
1. General information
| Official gene symbol | PIGF |
|---|---|
| Entrez ID | 5281 |
| Gene full name | phosphatidylinositol glycan anchor biosynthesis, class F |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004307 | Ethanolaminephosphotransferase activity | TAS | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA ISS TAS | cellular_component |
| GO:0006501 | C-terminal protein lipidation | TAS | biological_process |
| GO:0006506 | GPI anchor biosynthetic process | IEA ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016254 | Preassembly of GPI anchor in ER membrane | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7063856350 | 0.1271469891 | 0.9999902473 | 0.6864115669 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0536190696 |
| GSE13712_SHEAR | Down | -0.0426064266 |
| GSE13712_STATIC | Up | 0.0696765967 |
| GSE19018 | Up | 0.2359975627 |
| GSE19899_A1 | Down | -0.2911598009 |
| GSE19899_A2 | Down | -0.1917204252 |
| PubMed_21979375_A1 | Down | -0.1518857556 |
| PubMed_21979375_A2 | Down | -0.2375033075 |
| GSE35957 | Down | -0.1509454013 |
| GSE36640 | Up | 0.6719088906 |
| GSE54402 | Down | -0.4511512358 |
| GSE9593 | Down | -0.3352403369 |
| GSE43922 | Up | 0.0292062463 |
| GSE24585 | Down | -0.7350037388 |
| GSE37065 | Up | 0.0810300737 |
| GSE28863_A1 | Down | -0.0306569931 |
| GSE28863_A2 | Up | 0.1622706584 |
| GSE28863_A3 | Down | -0.3656818005 |
| GSE28863_A4 | Down | -0.0988982465 |
| GSE48662 | Up | 0.3368264373 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | MIRT006495 | Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 21703189 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT021528 | Reporter assay;Microarray | Functional MTI | 21351259 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
