HCSGD entry for A4GALT
1. General information
| Official gene symbol | A4GALT |
|---|---|
| Entrez ID | 53947 |
| Gene full name | alpha 1,4-galactosyltransferase |
| Other gene symbols | A14GALT A4GALT1 Gb3S P(k) P1 P1PK PK |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005795 | Golgi stack | IEA | cellular_component |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0006688 | Glycosphingolipid biosynthetic process | NAS | biological_process |
| GO:0007009 | Plasma membrane organization | IDA | biological_process |
| GO:0008378 | Galactosyltransferase activity | IDA | molecular_function |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0030173 | Integral component of Golgi membrane | NAS | cellular_component |
| GO:0050512 | Lactosylceramide 4-alpha-galactosyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0602079138 | 0.9322486456 | 0.5319943941 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0974804863 |
| GSE13712_SHEAR | Down | -0.0132716368 |
| GSE13712_STATIC | Up | 0.4940150733 |
| GSE19018 | Up | 0.1852859952 |
| GSE19899_A1 | Down | -0.0030547954 |
| GSE19899_A2 | Up | 0.0918876108 |
| PubMed_21979375_A1 | Down | -0.0070398971 |
| PubMed_21979375_A2 | Down | -0.0016838556 |
| GSE35957 | Down | -0.1439155036 |
| GSE36640 | Up | 0.2285681831 |
| GSE54402 | Up | 0.1240429760 |
| GSE9593 | Up | 0.2406391176 |
| GSE43922 | Up | 0.0948647523 |
| GSE24585 | Down | -0.1226877896 |
| GSE37065 | Up | 0.4023812295 |
| GSE28863_A1 | Up | 0.8644358074 |
| GSE28863_A2 | Up | 0.4847346235 |
| GSE28863_A3 | Down | -0.1121281985 |
| GSE28863_A4 | Up | 0.1842926598 |
| GSE48662 | Up | 0.3299733461 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016300 | Microarray | Functional MTI (Weak) | 20304954 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
