HCSGD entry for SEMA5B
1. General information
| Official gene symbol | SEMA5B |
|---|---|
| Entrez ID | 54437 |
| Gene full name | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B |
| Other gene symbols | SEMAG SemG |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6084932297 | 0.8497118878 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0987187170 |
| GSE13712_SHEAR | Up | 0.0554730236 |
| GSE13712_STATIC | Up | 0.0473737201 |
| GSE19018 | Down | -0.1110991738 |
| GSE19899_A1 | Down | -0.1015476165 |
| GSE19899_A2 | Down | -0.1181795395 |
| PubMed_21979375_A1 | Down | -0.0137826517 |
| PubMed_21979375_A2 | Down | -0.0290274489 |
| GSE35957 | Up | 0.2432711281 |
| GSE36640 | Up | 0.1092927307 |
| GSE54402 | Up | 0.1453756741 |
| GSE9593 | Up | 0.0740510102 |
| GSE43922 | Up | 0.0480922267 |
| GSE24585 | Down | -0.1239343417 |
| GSE37065 | Up | 0.0526064013 |
| GSE28863_A1 | Down | -0.0670716694 |
| GSE28863_A2 | Up | 0.1327103241 |
| GSE28863_A3 | Up | 0.3395912315 |
| GSE28863_A4 | Up | 0.0750690848 |
| GSE48662 | Up | 0.0273974359 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
