HCSGD entry for PCDH18
1. General information
| Official gene symbol | PCDH18 |
|---|---|
| Entrez ID | 54510 |
| Gene full name | protocadherin 18 |
| Other gene symbols | PCDH68L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0007420 | Brain development | IEA ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9836177501 | 0.0000863835 | 0.9999902473 | 0.0160272727 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3581965519 |
| GSE13712_SHEAR | Down | -0.2127206656 |
| GSE13712_STATIC | Down | -0.5381065600 |
| GSE19018 | Down | -0.6691641447 |
| GSE19899_A1 | Down | -1.3578767780 |
| GSE19899_A2 | Down | -2.8421730246 |
| PubMed_21979375_A1 | Down | -2.5271697676 |
| PubMed_21979375_A2 | Down | -1.5283476928 |
| GSE35957 | Down | -0.6786929111 |
| GSE36640 | Up | 0.8597089814 |
| GSE54402 | Down | -2.8463962855 |
| GSE9593 | Down | -0.2257652292 |
| GSE43922 | Down | -0.9160901362 |
| GSE24585 | Down | -0.9716490741 |
| GSE37065 | Up | 0.2249580327 |
| GSE28863_A1 | Up | 0.2574004101 |
| GSE28863_A2 | Down | -0.9525153563 |
| GSE28863_A3 | Down | -0.6651667343 |
| GSE28863_A4 | Down | -0.4058511539 |
| GSE48662 | Up | 0.1057376786 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
