HCSGD entry for AFTPH
1. General information
| Official gene symbol | AFTPH |
|---|---|
| Entrez ID | 54812 |
| Gene full name | aftiphilin |
| Other gene symbols | Nbla10388 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0030121 | AP-1 adaptor complex | IDA | cellular_component |
| GO:0030276 | Clathrin binding | IDA | molecular_function |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0157735116 | 0.9590274116 | 0.3109908003 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4812319796 |
| GSE13712_SHEAR | Down | -0.0088383399 |
| GSE13712_STATIC | Up | 0.1714380475 |
| GSE19018 | Down | -0.0928960553 |
| GSE19899_A1 | Up | 0.5581327129 |
| GSE19899_A2 | Up | 0.6896573989 |
| PubMed_21979375_A1 | Up | 1.1644540040 |
| PubMed_21979375_A2 | Up | 1.2903559774 |
| GSE35957 | Down | -0.4123417636 |
| GSE36640 | Up | 0.2493731130 |
| GSE54402 | Up | 0.4164135523 |
| GSE9593 | Up | 0.2255953840 |
| GSE43922 | Up | 0.6239405752 |
| GSE24585 | Down | -0.1657371274 |
| GSE37065 | Up | 0.3095155129 |
| GSE28863_A1 | Up | 0.0962336443 |
| GSE28863_A2 | Up | 0.2485809499 |
| GSE28863_A3 | Down | -0.4413402293 |
| GSE28863_A4 | Down | -0.1808412048 |
| GSE48662 | Up | 0.2449393090 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016058 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025206 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT031032 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
