HCSGD entry for CCDC109B
1. General information
| Official gene symbol | CCDC109B |
|---|---|
| Entrez ID | 55013 |
| Gene full name | coiled-coil domain containing 109B |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005216 | Ion channel activity | ISS | molecular_function |
| GO:0005739 | Mitochondrion | ISS | cellular_component |
| GO:0006851 | Mitochondrial calcium ion transport | ISS | biological_process |
| GO:0019855 | Calcium channel inhibitor activity | ISS | molecular_function |
| GO:0031224 | Intrinsic component of membrane | ISS | cellular_component |
| GO:0031305 | Integral component of mitochondrial inner membrane | IDA | cellular_component |
| GO:0034704 | Calcium channel complex | ISS | cellular_component |
| GO:0051560 | Mitochondrial calcium ion homeostasis | ISS | biological_process |
| GO:1990246 | Uniplex complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9812352266 | 0.0006306409 | 0.9999902473 | 0.0467580282 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6217804906 |
| GSE13712_SHEAR | Down | -0.5821904082 |
| GSE13712_STATIC | Down | -0.1940769210 |
| GSE19018 | Up | 0.1122691424 |
| GSE19899_A1 | Down | -1.7901774838 |
| GSE19899_A2 | Down | -2.3702403804 |
| PubMed_21979375_A1 | Down | -1.3601573583 |
| PubMed_21979375_A2 | Down | -2.4077258766 |
| GSE35957 | Down | -0.4726793029 |
| GSE36640 | Down | -3.3778213125 |
| GSE54402 | Down | -0.1047040635 |
| GSE9593 | Down | -0.5344755397 |
| GSE43922 | Down | -1.5084285268 |
| GSE24585 | Up | 0.1027679968 |
| GSE37065 | Up | 0.4524535234 |
| GSE28863_A1 | Up | 0.3072159939 |
| GSE28863_A2 | Up | 0.0886090973 |
| GSE28863_A3 | Down | -0.6466905826 |
| GSE28863_A4 | Down | -0.1201690637 |
| GSE48662 | Down | -0.7784572940 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029347 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042978 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
