HCSGD entry for SLC52A1
1. General information
| Official gene symbol | SLC52A1 |
|---|---|
| Entrez ID | 55065 |
| Gene full name | solute carrier family 52, riboflavin transporter, member 1 |
| Other gene symbols | GPCR42 GPR172B PAR2 RBFVD RFT1 RFVT1 hRFT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001618 | Virus receptor activity | IEA | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IDA | cellular_component |
| GO:0032217 | Riboflavin transporter activity | IDA | molecular_function |
| GO:0032218 | Riboflavin transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8236835265 | 0.5478906501 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0561754317 |
| GSE13712_SHEAR | Up | 0.0061887170 |
| GSE13712_STATIC | Down | -0.1700463937 |
| GSE19018 | Down | -0.0640011603 |
| GSE19899_A1 | Down | -0.2059236763 |
| GSE19899_A2 | Down | -0.1235720389 |
| PubMed_21979375_A1 | Down | -0.1800667793 |
| PubMed_21979375_A2 | Up | 0.1310039514 |
| GSE35957 | Up | 0.1959631446 |
| GSE36640 | Up | 0.0583745578 |
| GSE54402 | Up | 0.0076922296 |
| GSE9593 | Down | -0.0656265173 |
| GSE43922 | Up | 0.0255676777 |
| GSE24585 | Down | -0.0276936770 |
| GSE37065 | Down | -0.0495563343 |
| GSE28863_A1 | Down | -0.1207811083 |
| GSE28863_A2 | Down | -0.1033019046 |
| GSE28863_A3 | Up | 0.2476354759 |
| GSE28863_A4 | Up | 0.1658096570 |
| GSE48662 | Up | 0.0036207918 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017822 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
