HCSGD entry for RNF31
1. General information
| Official gene symbol | RNF31 |
|---|---|
| Entrez ID | 55072 |
| Gene full name | ring finger protein 31 |
| Other gene symbols | HOIP ZIBRA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000209 | Protein polyubiquitination | IDA | biological_process |
| GO:0004842 | Ubiquitin-protein ligase activity | IDA IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0009898 | Cytoplasmic side of plasma membrane | ISS | cellular_component |
| GO:0023035 | CD40 signaling pathway | ISS | biological_process |
| GO:0035631 | CD40 receptor complex | ISS | cellular_component |
| GO:0043123 | Positive regulation of I-kappaB kinase/NF-kappaB signaling | IDA | biological_process |
| GO:0043130 | Ubiquitin binding | IDA | molecular_function |
| GO:0050852 | T cell receptor signaling pathway | IDA | biological_process |
| GO:0051092 | Positive regulation of NF-kappaB transcription factor activity | IDA | biological_process |
| GO:0071797 | LUBAC complex | IDA IEA | cellular_component |
| GO:0097039 | Protein linear polyubiquitination | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2331004445 | 0.9597009346 | 0.9167691365 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0126996903 |
| GSE13712_SHEAR | Up | 0.1279123124 |
| GSE13712_STATIC | Up | 0.0300048448 |
| GSE19018 | Up | 0.1160004674 |
| GSE19899_A1 | Up | 0.1270949230 |
| GSE19899_A2 | Down | -0.0181547833 |
| PubMed_21979375_A1 | Down | -0.0624937926 |
| PubMed_21979375_A2 | Down | -0.1400448088 |
| GSE35957 | Up | 0.2204027389 |
| GSE36640 | Up | 0.1724648233 |
| GSE54402 | Up | 0.1708448379 |
| GSE9593 | Up | 0.0663182441 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.3208765138 |
| GSE28863_A2 | Up | 0.5606956871 |
| GSE28863_A3 | Down | -0.2713223520 |
| GSE28863_A4 | Down | -0.0254856069 |
| GSE48662 | Up | 0.2406843749 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
