HCSGD entry for GPATCH2
1. General information
| Official gene symbol | GPATCH2 |
|---|---|
| Entrez ID | 55105 |
| Gene full name | G patch domain containing 2 |
| Other gene symbols | CT110 GPATC2 PPP1R30 RP11-361K17.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0010923 | Negative regulation of phosphatase activity | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5877206869 | 0.5082005015 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0684419496 |
| GSE13712_SHEAR | Up | 0.0006956175 |
| GSE13712_STATIC | Down | -0.0562764874 |
| GSE19018 | Down | -0.4835907994 |
| GSE19899_A1 | Up | 0.1002196712 |
| GSE19899_A2 | Down | -0.3367577632 |
| PubMed_21979375_A1 | Up | 0.3525840642 |
| PubMed_21979375_A2 | Up | 0.2303570609 |
| GSE35957 | Down | -0.0121653318 |
| GSE36640 | Down | -0.2892831116 |
| GSE54402 | Up | 0.2191077750 |
| GSE9593 | Down | -0.1217260566 |
| GSE43922 | Up | 0.0498130125 |
| GSE24585 | Up | 0.3526015827 |
| GSE37065 | Up | 0.1726833652 |
| GSE28863_A1 | Up | 0.0617407142 |
| GSE28863_A2 | Up | 0.1349561632 |
| GSE28863_A3 | Down | -0.3005174739 |
| GSE28863_A4 | Down | -0.1381232142 |
| GSE48662 | Down | -0.2274354234 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020254 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028123 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029984 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
