HCSGD entry for TBCCD1
1. General information
| Official gene symbol | TBCCD1 |
|---|---|
| Entrez ID | 55171 |
| Gene full name | TBCC domain containing 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000902 | Cell morphogenesis | IEA | biological_process |
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007010 | Cytoskeleton organization | IEA | biological_process |
| GO:0008360 | Regulation of cell shape | IMP | biological_process |
| GO:0030334 | Regulation of cell migration | IMP | biological_process |
| GO:0031616 | Spindle pole centrosome | IDA | cellular_component |
| GO:0051661 | Maintenance of centrosome location | IMP | biological_process |
| GO:0051684 | Maintenance of Golgi location | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5840695946 | 0.1692610767 | 0.9999902473 | 0.7958486424 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1396854189 |
| GSE13712_SHEAR | Up | 0.0503958393 |
| GSE13712_STATIC | Up | 0.1753828436 |
| GSE19018 | Down | -0.4764363881 |
| GSE19899_A1 | Up | 0.3164566603 |
| GSE19899_A2 | Up | 0.1250940037 |
| PubMed_21979375_A1 | Up | 0.6969278901 |
| PubMed_21979375_A2 | Down | -0.2649807340 |
| GSE35957 | Up | 0.3133275203 |
| GSE36640 | Up | 0.0802000420 |
| GSE54402 | Up | 0.0795107858 |
| GSE9593 | Down | -0.5057330567 |
| GSE43922 | Up | 0.1268575274 |
| GSE24585 | Up | 0.3339005050 |
| GSE37065 | Down | -0.2822396181 |
| GSE28863_A1 | Down | -0.2111623589 |
| GSE28863_A2 | Down | -0.0191988650 |
| GSE28863_A3 | Down | -0.5036208709 |
| GSE28863_A4 | Down | -0.2715379173 |
| GSE48662 | Down | -0.0756975480 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-195-5p | MIMAT0000461 | MIRT006245 | Luciferase reporter assay//Western blot | Functional MTI | 22217655 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029823 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
