HCSGD entry for RNMTL1
1. General information
| Official gene symbol | RNMTL1 |
|---|---|
| Entrez ID | 55178 |
| Gene full name | RNA methyltransferase like 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0006396 | RNA processing | IEA | biological_process |
| GO:0008173 | RNA methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0139909730 | 0.7148118119 | 0.2939858506 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4309694942 |
| GSE13712_SHEAR | Up | 0.4927356122 |
| GSE13712_STATIC | Up | 0.4522154641 |
| GSE19018 | Up | 0.0701120255 |
| GSE19899_A1 | Up | 0.5256874901 |
| GSE19899_A2 | Up | 1.0280418061 |
| PubMed_21979375_A1 | Up | 1.8549578738 |
| PubMed_21979375_A2 | Up | 1.6057916605 |
| GSE35957 | Down | -0.6344768731 |
| GSE36640 | Down | -0.4235941095 |
| GSE54402 | Up | 0.4997754533 |
| GSE9593 | Down | -0.4622708575 |
| GSE43922 | Up | 0.6367543940 |
| GSE24585 | Down | -0.2779876199 |
| GSE37065 | Up | 0.2101278722 |
| GSE28863_A1 | Up | 0.0696579688 |
| GSE28863_A2 | Down | -0.1787375811 |
| GSE28863_A3 | Down | -0.5779312260 |
| GSE28863_A4 | Down | -0.0493828237 |
| GSE48662 | Down | -0.0719836057 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT031612 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032260 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-484 | MIMAT0002174 | MIRT042205 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
