HCSGD entry for PSPC1
1. General information
| Official gene symbol | PSPC1 |
|---|---|
| Entrez ID | 55269 |
| Gene full name | paraspeckle component 1 |
| Other gene symbols | PSP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0016363 | Nuclear matrix | IEA | cellular_component |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
| GO:0042382 | Paraspeckles | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3545119676 | 0.8192223890 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2217606431 |
| GSE13712_SHEAR | Up | 0.1385328564 |
| GSE13712_STATIC | Up | 0.1428592536 |
| GSE19018 | Down | -0.4965161574 |
| GSE19899_A1 | Up | 0.0616608302 |
| GSE19899_A2 | Up | 0.5371789304 |
| PubMed_21979375_A1 | Up | 0.5031995776 |
| PubMed_21979375_A2 | Down | -0.3479872332 |
| GSE35957 | Down | -0.1595185561 |
| GSE36640 | Down | -0.0008194785 |
| GSE54402 | Up | 0.2446714475 |
| GSE9593 | Down | -0.1359237101 |
| GSE43922 | Up | 0.0057673679 |
| GSE24585 | Up | 0.1617529996 |
| GSE37065 | Up | 0.0985668281 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.1127817042 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
