HCSGD entry for LARP6
1. General information
| Official gene symbol | LARP6 |
|---|---|
| Entrez ID | 55323 |
| Gene full name | La ribonucleoprotein domain family, member 6 |
| Other gene symbols | ACHN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006396 | RNA processing | IEA | biological_process |
| GO:0006417 | Regulation of translation | IEA | biological_process |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0215561453 | 0.9742510239 | 0.3535073520 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5295572079 |
| GSE13712_SHEAR | Up | 0.2404760664 |
| GSE13712_STATIC | Down | -0.2235972847 |
| GSE19018 | Up | 0.2669085294 |
| GSE19899_A1 | Up | 0.5164222932 |
| GSE19899_A2 | Up | 0.6571515681 |
| PubMed_21979375_A1 | Up | 0.0995709901 |
| PubMed_21979375_A2 | Up | 0.5065035303 |
| GSE35957 | Down | -0.1690428372 |
| GSE36640 | Up | 0.5045926585 |
| GSE54402 | Up | 0.5238029298 |
| GSE9593 | Up | 0.7580239731 |
| GSE43922 | Down | -0.0134283499 |
| GSE24585 | Up | 0.0408659762 |
| GSE37065 | Down | -0.0415364695 |
| GSE28863_A1 | Up | 0.1575271840 |
| GSE28863_A2 | Up | 0.1713492821 |
| GSE28863_A3 | Down | -0.4739016219 |
| GSE28863_A4 | Up | 0.1037508241 |
| GSE48662 | Up | 0.3916001220 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-744-5p | MIMAT0004945 | MIRT037593 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
