HCSGD entry for RAB20
1. General information
| Official gene symbol | RAB20 |
|---|---|
| Entrez ID | 55647 |
| Gene full name | RAB20, member RAS oncogene family |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0007264 | Small GTPase mediated signal transduction | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0030670 | Phagocytic vesicle membrane | IEA | cellular_component |
| GO:0045335 | Phagocytic vesicle | IDA | cellular_component |
| GO:0090383 | Phagosome acidification | IMP | biological_process |
| GO:0090385 | Phagosome-lysosome fusion | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8053550587 | 0.1917160518 | 0.9999902473 | 0.8502372704 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3270475712 |
| GSE13712_SHEAR | Up | 0.2077140305 |
| GSE13712_STATIC | Up | 0.0776421733 |
| GSE19018 | Up | 0.3261212407 |
| GSE19899_A1 | Up | 0.0112952090 |
| GSE19899_A2 | Down | -0.0652947689 |
| PubMed_21979375_A1 | Down | -0.1918177293 |
| PubMed_21979375_A2 | Down | -0.0751948383 |
| GSE35957 | Down | -0.2425046477 |
| GSE36640 | Down | -0.8906691936 |
| GSE54402 | Down | -0.2329405662 |
| GSE9593 | Down | -0.3658055771 |
| GSE43922 | Up | 0.0303212706 |
| GSE24585 | Down | -0.0598567069 |
| GSE37065 | Up | 0.0008096780 |
| GSE28863_A1 | Down | -0.0950634464 |
| GSE28863_A2 | Down | -0.0942282464 |
| GSE28863_A3 | Up | 0.2093029236 |
| GSE28863_A4 | Up | 0.1273793164 |
| GSE48662 | Down | -0.0311443550 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
