HCSGD entry for RABL6
1. General information
| Official gene symbol | RABL6 |
|---|---|
| Entrez ID | 55684 |
| Gene full name | RAB, member RAS oncogene family-like 6 |
| Other gene symbols | C9orf86 PARF RBEL1 pp8875 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0007264 | Small GTPase mediated signal transduction | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1576624558 | 0.8804507086 | 0.7879303778 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0129855309 |
| GSE13712_SHEAR | Down | -0.0872410790 |
| GSE13712_STATIC | Down | -0.0935261202 |
| GSE19018 | Up | 0.0261429225 |
| GSE19899_A1 | Up | 0.2254342685 |
| GSE19899_A2 | Up | 0.5021429018 |
| PubMed_21979375_A1 | Up | 1.0931779258 |
| PubMed_21979375_A2 | Up | 0.7785270644 |
| GSE35957 | Down | -0.3252189272 |
| GSE36640 | Down | -0.0939538535 |
| GSE54402 | Up | 0.1733096246 |
| GSE9593 | Down | -0.1742956219 |
| GSE43922 | Up | 0.1139166230 |
| GSE24585 | Down | -0.2029382271 |
| GSE37065 | Down | -0.1854486764 |
| GSE28863_A1 | Down | -0.0590283403 |
| GSE28863_A2 | Up | 0.0466884362 |
| GSE28863_A3 | Up | 0.2589265933 |
| GSE28863_A4 | Up | 0.1282895294 |
| GSE48662 | Up | 0.2212887101 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036470 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-425-5p | MIMAT0003393 | MIRT039336 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042281 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-191-5p | MIMAT0000440 | MIRT045800 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046592 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047585 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051536 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
