HCSGD entry for LMBRD1
1. General information
| Official gene symbol | LMBRD1 |
|---|---|
| Entrez ID | 55788 |
| Gene full name | LMBR1 domain containing 1 |
| Other gene symbols | C6orf209 LMBD1 MAHCF NESI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005765 | Lysosomal membrane | TAS | cellular_component |
| GO:0006766 | Vitamin metabolic process | TAS | biological_process |
| GO:0006767 | Water-soluble vitamin metabolic process | TAS | biological_process |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0009235 | Cobalamin metabolic process | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0031419 | Cobalamin binding | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2730316249 | 0.4520703545 | 0.9702070937 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0485506550 |
| GSE13712_SHEAR | Down | -0.2998684866 |
| GSE13712_STATIC | Down | -0.1052317908 |
| GSE19018 | Up | 0.3489025815 |
| GSE19899_A1 | Up | 0.0643026245 |
| GSE19899_A2 | Down | -0.1236902968 |
| PubMed_21979375_A1 | Down | -0.5937493955 |
| PubMed_21979375_A2 | Up | 0.0861239513 |
| GSE35957 | Up | 0.2209830058 |
| GSE36640 | Up | 0.7678891519 |
| GSE54402 | Down | -0.2733386673 |
| GSE9593 | Up | 0.0810650824 |
| GSE43922 | Down | -0.0297275656 |
| GSE24585 | Up | 0.2853772816 |
| GSE37065 | Up | 0.2344052616 |
| GSE28863_A1 | Up | 0.2780629840 |
| GSE28863_A2 | Up | 0.2460951691 |
| GSE28863_A3 | Down | -0.1856264019 |
| GSE28863_A4 | Down | -0.3273371949 |
| GSE48662 | Up | 0.2755475164 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019020 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
