HCSGD entry for CENPN
1. General information
| Official gene symbol | CENPN |
|---|---|
| Entrez ID | 55839 |
| Gene full name | centromere protein N |
| Other gene symbols | BM039 C16orf60 CENP-N ICEN32 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000775 | Chromosome, centromeric region | IEA | cellular_component |
| GO:0000777 | Condensed chromosome kinetochore | IEA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006334 | Nucleosome assembly | TAS | biological_process |
| GO:0007059 | Chromosome segregation | IEA | biological_process |
| GO:0007067 | Mitosis | IEA | biological_process |
| GO:0034080 | CENP-A containing nucleosome assembly at centromere | TAS | biological_process |
| GO:0034508 | Centromere complex assembly | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9546749326 | 0.0022568937 | 0.9999902473 | 0.0913903077 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4119410363 |
| GSE13712_SHEAR | Up | 0.0658425235 |
| GSE13712_STATIC | Down | -0.2258905000 |
| GSE19018 | Down | -0.3121086413 |
| GSE19899_A1 | Down | -0.5197595982 |
| GSE19899_A2 | Down | -1.5118716857 |
| PubMed_21979375_A1 | Up | 0.1455665860 |
| PubMed_21979375_A2 | Down | -1.5427607691 |
| GSE35957 | Down | -1.6429638345 |
| GSE36640 | Down | -2.6253680740 |
| GSE54402 | Down | -0.2410459158 |
| GSE9593 | Down | -0.5689852906 |
| GSE43922 | Down | -0.0317494323 |
| GSE24585 | Up | 0.1005805826 |
| GSE37065 | Down | -0.4029301913 |
| GSE28863_A1 | Down | -0.5736956750 |
| GSE28863_A2 | Up | 0.4735638698 |
| GSE28863_A3 | Down | -0.3304413353 |
| GSE28863_A4 | Up | 0.4465780584 |
| GSE48662 | Down | -0.6285103714 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031109 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
