HCSGD entry for TMEM165
1. General information
| Official gene symbol | TMEM165 |
|---|---|
| Entrez ID | 55858 |
| Gene full name | transmembrane protein 165 |
| Other gene symbols | CDG2K FT27 GDT1 TMPT27 TPARL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006487 | Protein N-linked glycosylation | IMP | biological_process |
| GO:0006874 | Cellular calcium ion homeostasis | IGI | biological_process |
| GO:0010008 | Endosome membrane | IDA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031901 | Early endosome membrane | IEA | cellular_component |
| GO:0031902 | Late endosome membrane | IEA | cellular_component |
| GO:0032472 | Golgi calcium ion transport | IDA | biological_process |
| GO:0032588 | Trans-Golgi network membrane | IDA | cellular_component |
| GO:0035751 | Regulation of lysosomal lumen pH | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9241816192 | 0.1465918734 | 0.9999902473 | 0.7397324962 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0334575067 |
| GSE13712_SHEAR | Up | 0.0503459022 |
| GSE13712_STATIC | Down | -0.1901604868 |
| GSE19018 | Down | -0.1065680985 |
| GSE19899_A1 | Down | -0.3447498692 |
| GSE19899_A2 | Down | -0.0355135829 |
| PubMed_21979375_A1 | Down | -0.0204866044 |
| PubMed_21979375_A2 | Down | -0.3693447272 |
| GSE35957 | Down | -0.0136016541 |
| GSE36640 | Up | 0.1614345040 |
| GSE54402 | Down | -0.0390807526 |
| GSE9593 | Up | 0.2208326479 |
| GSE43922 | Down | -0.2054532890 |
| GSE24585 | Up | 0.1721024964 |
| GSE37065 | Up | 0.1873970652 |
| GSE28863_A1 | Up | 0.1321199149 |
| GSE28863_A2 | Up | 0.2003568777 |
| GSE28863_A3 | Down | -0.4863055963 |
| GSE28863_A4 | Down | -0.2458973337 |
| GSE48662 | Down | -0.8200487155 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028789 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039158 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050801 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051768 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052436 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
