HCSGD entry for BEX1
1. General information
| Official gene symbol | BEX1 |
|---|---|
| Entrez ID | 55859 |
| Gene full name | brain expressed, X-linked 1 |
| Other gene symbols | BEX2 HBEX2 HGR74-h |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001102 | RNA polymerase II activating transcription factor binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005667 | Transcription factor complex | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
| GO:0051091 | Positive regulation of sequence-specific DNA binding transcription factor activity | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0000400517 | 0.1506218191 | 0.0178677966 | 0.7500346765 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 2.0081269181 |
| GSE13712_SHEAR | Down | -0.1636148556 |
| GSE13712_STATIC | Up | 0.1469960803 |
| GSE19018 | Up | 0.2712810791 |
| GSE19899_A1 | Up | 1.4133161398 |
| GSE19899_A2 | Up | 7.1213756821 |
| PubMed_21979375_A1 | Up | 5.9828191221 |
| PubMed_21979375_A2 | Up | 7.4234701006 |
| GSE35957 | Down | -0.3408115486 |
| GSE36640 | Up | 2.2059147303 |
| GSE54402 | Up | 5.6036816644 |
| GSE9593 | Down | -1.3596910554 |
| GSE43922 | Up | 1.6036200121 |
| GSE24585 | Up | 0.1506688675 |
| GSE37065 | Down | -0.0657334450 |
| GSE28863_A1 | Down | -0.9318471359 |
| GSE28863_A2 | Up | 0.9798938481 |
| GSE28863_A3 | Down | -0.6994508413 |
| GSE28863_A4 | Down | -0.2145177570 |
| GSE48662 | Down | -1.0830361183 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022761 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030491 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046447 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
