HCSGD entry for YLPM1
1. General information
| Official gene symbol | YLPM1 |
|---|---|
| Entrez ID | 56252 |
| Gene full name | YLP motif containing 1 |
| Other gene symbols | C14orf170 ZAP113 ZAP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1459322062 | 0.3744741005 | 0.7661474786 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0885656673 |
| GSE13712_SHEAR | Down | -0.1944102850 |
| GSE13712_STATIC | Down | -0.2049839271 |
| GSE19018 | Up | 0.0733478018 |
| GSE19899_A1 | Up | 0.1500359256 |
| GSE19899_A2 | Down | -0.1074620324 |
| PubMed_21979375_A1 | Down | -0.5786473415 |
| PubMed_21979375_A2 | Up | 0.2653470519 |
| GSE35957 | Down | -0.0516807132 |
| GSE36640 | Down | -0.3009857283 |
| GSE54402 | Up | 0.1061540130 |
| GSE9593 | Down | -0.1252972325 |
| GSE43922 | Down | -0.1742282993 |
| GSE24585 | Up | 0.0131207990 |
| GSE37065 | Down | -0.0799813767 |
| GSE28863_A1 | Up | 1.6243519001 |
| GSE28863_A2 | Up | 1.4641801262 |
| GSE28863_A3 | Down | -0.1074755309 |
| GSE28863_A4 | Down | -0.0598953802 |
| GSE48662 | Down | -0.0549343677 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-222-3p | MIMAT0000279 | MIRT046757 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052085 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
