HCSGD entry for GPCPD1
1. General information
| Official gene symbol | GPCPD1 |
|---|---|
| Entrez ID | 56261 |
| Gene full name | glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) |
| Other gene symbols | GDE5 GDPD6 PREI4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0006071 | Glycerol metabolic process | IEA | biological_process |
| GO:0006629 | Lipid metabolic process | IEA | biological_process |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0008889 | Glycerophosphodiester phosphodiesterase activity | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046474 | Glycerophospholipid biosynthetic process | TAS | biological_process |
| GO:0047389 | Glycerophosphocholine phosphodiesterase activity | IEA | molecular_function |
| GO:2001070 | Starch binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7033475286 | 0.0134994225 | 0.9999902473 | 0.2293416237 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1044005166 |
| GSE13712_SHEAR | Down | -0.2316718075 |
| GSE13712_STATIC | Down | -0.2009248846 |
| GSE19018 | Down | -0.2302860548 |
| GSE19899_A1 | Down | -0.5521613371 |
| GSE19899_A2 | Down | -1.5122871518 |
| PubMed_21979375_A1 | Down | -0.0260239066 |
| PubMed_21979375_A2 | Down | -0.6896487493 |
| GSE35957 | Up | 0.2527834263 |
| GSE36640 | Down | -0.6983622897 |
| GSE54402 | Down | -1.8483907786 |
| GSE9593 | Down | -0.1099736340 |
| GSE43922 | Down | -0.1084426354 |
| GSE24585 | Up | 0.7581131918 |
| GSE37065 | Up | 0.1297977053 |
| GSE28863_A1 | Up | 0.2309298427 |
| GSE28863_A2 | Down | -0.3854118991 |
| GSE28863_A3 | Down | -0.2014013184 |
| GSE28863_A4 | Up | 0.0136221570 |
| GSE48662 | Up | 0.1738034112 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-5p | MIMAT0003886 | MIRT039150 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
