HCSGD entry for WDR45B
1. General information
| Official gene symbol | WDR45B |
|---|---|
| Entrez ID | 56270 |
| Gene full name | WD repeat domain 45B |
| Other gene symbols | WDR45L WIPI-3 WIPI3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000045 | Autophagic vacuole assembly | IBA | biological_process |
| GO:0005737 | Cytoplasm | IBA | cellular_component |
| GO:0032266 | Phosphatidylinositol-3-phosphate binding | IBA | molecular_function |
| GO:0080025 | Phosphatidylinositol-3,5-bisphosphate binding | IBA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2688180236 | 0.7530075035 | 0.9656829808 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5176428476 |
| GSE13712_SHEAR | Up | 0.5042084146 |
| GSE13712_STATIC | Up | 0.2551563542 |
| GSE19018 | Up | 0.4236115958 |
| GSE19899_A1 | Down | -0.1478529197 |
| GSE19899_A2 | Up | 0.2373875586 |
| PubMed_21979375_A1 | Down | -0.1368776689 |
| PubMed_21979375_A2 | Up | 0.3283448613 |
| GSE35957 | Up | 0.0809078164 |
| GSE36640 | Down | -0.0015692855 |
| GSE54402 | Up | 0.1747577946 |
| GSE9593 | Up | 0.0269938128 |
| GSE43922 | Down | -0.0588385516 |
| GSE24585 | Up | 0.2004025362 |
| GSE37065 | Down | -0.0818868546 |
| GSE28863_A1 | Down | -0.2108756265 |
| GSE28863_A2 | Up | 0.0077333616 |
| GSE28863_A3 | Up | 0.1219444018 |
| GSE28863_A4 | Up | 0.1834807479 |
| GSE48662 | Up | 0.0809095571 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-744-5p | MIMAT0004945 | MIRT037428 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-766-3p | MIMAT0003888 | MIRT039009 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
