HCSGD entry for CLDND1
1. General information
| Official gene symbol | CLDND1 |
|---|---|
| Entrez ID | 56650 |
| Gene full name | claudin domain containing 1 |
| Other gene symbols | C3orf4 GENX-3745 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016324 | Apical plasma membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8654454580 | 0.2362989894 | 0.9999902473 | 0.9361266857 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1120914644 |
| GSE13712_SHEAR | Down | -0.6546471947 |
| GSE13712_STATIC | Down | -0.3625121979 |
| GSE19018 | Up | 0.1495204552 |
| GSE19899_A1 | Up | 0.0070253536 |
| GSE19899_A2 | Down | -0.4003545023 |
| PubMed_21979375_A1 | Up | 0.0069863962 |
| PubMed_21979375_A2 | Down | -0.1301689479 |
| GSE35957 | Down | -0.4622864442 |
| GSE36640 | Up | 0.3143297648 |
| GSE54402 | Up | 0.0000062237 |
| GSE9593 | Down | -0.0102900425 |
| GSE43922 | Down | -0.0244526814 |
| GSE24585 | Up | 0.3528472782 |
| GSE37065 | Up | 0.2410822720 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0854290972 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT004926 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004926 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049185 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
