HCSGD entry for PCNP
1. General information
| Official gene symbol | PCNP |
|---|---|
| Entrez ID | 57092 |
| Gene full name | PEST proteolytic signal containing nuclear protein |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0016567 | Protein ubiquitination | IDA | biological_process |
| GO:0043161 | Proteasome-mediated ubiquitin-dependent protein catabolic process | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9564030052 | 0.1525579081 | 0.9999902473 | 0.7546470024 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0992290482 |
| GSE13712_SHEAR | Down | -0.1210436007 |
| GSE13712_STATIC | Down | -0.0107806377 |
| GSE19018 | Up | 0.2864778809 |
| GSE19899_A1 | Up | 0.0032642422 |
| GSE19899_A2 | Down | -0.4659870784 |
| PubMed_21979375_A1 | Down | -0.5006800608 |
| PubMed_21979375_A2 | Down | -0.1678331057 |
| GSE35957 | Down | -0.0620547857 |
| GSE36640 | Down | -0.1047118877 |
| GSE54402 | Down | -0.1989938909 |
| GSE9593 | Up | 0.0189751322 |
| GSE43922 | Down | -0.2065350573 |
| GSE24585 | Down | -0.0671233310 |
| GSE37065 | Down | -0.0234463154 |
| GSE28863_A1 | Down | -0.2992347249 |
| GSE28863_A2 | Up | 0.0070219002 |
| GSE28863_A3 | Up | 0.0813943995 |
| GSE28863_A4 | Down | -0.1026210489 |
| GSE48662 | Down | -0.1018531350 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-18a-5p | MIMAT0000072 | MIRT031330 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032117 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045082 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
