HCSGD entry for USP36
1. General information
| Official gene symbol | USP36 |
|---|---|
| Entrez ID | 57602 |
| Gene full name | ubiquitin specific peptidase 36 |
| Other gene symbols | DUB1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004221 | Ubiquitin thiolesterase activity | IEA | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006511 | Ubiquitin-dependent protein catabolic process | IEA | biological_process |
| GO:0008234 | Cysteine-type peptidase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0404783823 | 0.9519105505 | 0.4509501481 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0620146276 |
| GSE13712_SHEAR | Up | 0.7655046917 |
| GSE13712_STATIC | Up | 0.6421889868 |
| GSE19018 | Down | -0.2774217815 |
| GSE19899_A1 | Up | 0.0097372800 |
| GSE19899_A2 | Up | 0.7888119314 |
| PubMed_21979375_A1 | Up | 0.4867701896 |
| PubMed_21979375_A2 | Up | 0.4495486648 |
| GSE35957 | Down | -0.0161811458 |
| GSE36640 | Up | 0.0562626234 |
| GSE54402 | Up | 0.3132201728 |
| GSE9593 | Up | 0.2275414157 |
| GSE43922 | Up | 0.1550180425 |
| GSE24585 | Down | -0.2611196899 |
| GSE37065 | Down | -0.0139963564 |
| GSE28863_A1 | Up | 0.2970601303 |
| GSE28863_A2 | Up | 0.4404645455 |
| GSE28863_A3 | Up | 0.1485740508 |
| GSE28863_A4 | Up | 0.0352646915 |
| GSE48662 | Down | -0.0852224544 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027793 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-342-5p | MIMAT0004694 | MIRT038207 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040098 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-151a-3p | MIMAT0000757 | MIRT043617 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
